STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH55874.1Tyrosine protein phosphatase. (254 aa)    
Predicted Functional Partners:
AOH55876.1
Capsular biosynthesis protein.
 
 
 0.945
AOH55875.1
Capsular biosynthesis protein.
  
 0.934
AOH53634.1
Tyrosine protein phosphatase.
  
  
 
0.905
AOH55845.1
Capsule biosynthesis protein CapK.
 
 
 0.895
AOH53629.1
Hypothetical protein.
  
 0.863
AOH55846.1
Capsular biosynthesis protein.
 
  
 0.847
AOH53628.1
Hypothetical protein.
 
   
 0.813
AOH55873.1
Hypothetical protein.
 
  
 0.599
AOH55871.1
UDP-galactose phosphate transferase.
 
  
 0.567
AOH55866.1
Capsular biosynthesis protein.
  
  
 0.494
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.