STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH56089.1Hypothetical protein. (230 aa)    
Predicted Functional Partners:
AOH56088.1
Sporulation protein YtfJ.
 
    0.943
AOH55662.1
Stage III sporulation protein AF.
  
     0.718
AOH55952.1
Stage VI sporulation protein D.
  
    0.711
AOH55663.1
Stage III sporulation protein AE.
  
     0.685
AOH52761.1
Hypothetical protein.
  
     0.683
AOH55951.1
Spore coat protein YsxE.
  
     0.683
AOH55724.1
Hypothetical protein.
  
     0.679
AOH55817.1
Hypothetical protein.
  
     0.662
AOH55989.1
Sporulation protein.
  
    0.662
AOH52814.1
Spore cortex biosynthesis protein YabQ.
  
     0.657
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.