STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH56091.1Signal peptide peptidase SppA. (333 aa)    
Predicted Functional Partners:
AOH56090.1
Hypothetical protein.
 
  
 0.954
AOH53002.1
Hypothetical protein.
 
    0.575
AOH53003.1
Hypothetical protein.
 
    0.524
AOH52969.1
Non-ribosomal peptide synthetase.
 
   
 0.498
AOH56089.1
Hypothetical protein.
       0.473
secF
Protein translocase subunit SecDF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
 
   
 0.469
AOH56088.1
Sporulation protein YtfJ.
       0.463
AOH53203.1
Hypothetical protein.
 
    0.448
AOH53204.1
Hypothetical protein.
 
    0.429
AOH56443.1
Hypothetical protein.
 
  
 0.412
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.