STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH56352.1Hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (455 aa)    
Predicted Functional Partners:
AOH56349.1
Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine.
 
    0.843
AOH56350.1
Acyl CoA:acetate/3-ketoacid CoA transferase subunit beta.
  
    0.788
AOH56351.1
Acyl CoA:acetate/3-ketoacid CoA transferase subunit alpha.
  
    0.781
AOH56353.1
Putative beta-lysine N-acetyltransferase.
 
  
 0.774
bioB
Biotin synthase BioB; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
 
  
 0.639
bioD
Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
  
  
 0.627
AOH56355.1
Lysine 2,3-aminomutase.
  
    0.588
AOH56354.1
Hypothetical protein.
     
 0.541
AOH55323.1
Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine.
 
    0.514
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.453
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
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