STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH56507.1Hypothetical protein. (389 aa)    
Predicted Functional Partners:
AOH56506.1
Aldehyde dehydrogenase.
 
 
 0.822
AOH54903.1
Alcohol dehydrogenase.
  
 
 0.767
AOH56508.1
2-deoxy-D-gluconate 3-dehydrogenase.
 
 
 0.689
AOH56503.1
Hypothetical protein; Belongs to the HpcH/HpaI aldolase family.
     
 0.650
glgA
Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.640
AOH56504.1
Hypothetical protein.
     
 0.638
AOH56505.1
Hypothetical protein.
       0.623
pckA
Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
   
  
 0.535
AOH53804.1
Hypothetical protein.
 
  
 0.484
AOH54365.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
  
 0.480
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.