STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH56517.1Carbon starvation protein CstA. (597 aa)    
Predicted Functional Partners:
AOH53189.1
Cytosolic protein.
 
  
 0.814
AOH56519.1
Histidine kinase.
 
   
 0.688
AOH56518.1
DNA-binding response regulator.
 
   
 0.637
AOH56516.1
DUF1540 domain-containing protein.
       0.561
AOH53280.1
Sodium:solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.495
AOH53504.1
Sodium:solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.495
AOH54948.1
Sodium:solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.495
AOH55043.1
Sodium:solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.495
AOH56553.1
Transporter.
  
    0.495
AOH54974.1
acetoacetate--CoA ligase.
   
    0.491
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
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