STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH56536.1Bacteriocin biosynthesis protein SagD. (646 aa)    
Predicted Functional Partners:
AOH56535.1
NADH oxidase.
 
  
 0.981
AOH56537.1
Putative thiazole-containing bacteriocin maturation protein.
 
  
 0.961
AOH53181.1
Hypothetical protein.
  
  
 0.720
AOH52917.1
Hypothetical protein.
  
  
 0.605
AOH53028.1
Abortive infection protein.
  
  
 0.605
AOH55553.1
Hypothetical protein.
  
  
 0.605
AOH53295.1
Hypothetical protein.
  
     0.553
AOH56538.1
Hypothetical protein.
       0.553
AOH53126.1
Nitroreductase.
  
  
 0.551
AOH53182.1
Nitroreductase.
  
  
 0.551
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.