STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH56794.1Multidrug efflux MATE transporter FepA. (453 aa)    
Predicted Functional Partners:
AOH55537.1
30S ribosomal protein S1.
  
    0.588
AOH56043.1
Type I glyceraldehyde-3-phosphate dehydrogenase; NAD-dependent; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; active during glycolysis; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.533
AOH57056.1
Type I glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.533
AOH53229.1
Phytoene synthase.
   
 
 0.531
AOH55430.1
Phytoene synthase.
   
 
 0.531
AOH55619.1
Phytoene synthase.
   
 
 0.531
AOH56301.1
Phosphoesterase.
   
 
 0.531
AOH56795.1
Hypothetical protein.
       0.493
AOH56793.1
Hypothetical protein.
       0.424
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
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