STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH57009.1Hypothetical protein. (176 aa)    
Predicted Functional Partners:
AOH56461.1
Spore gernimation protein GerQ.
  
    0.754
AOH54150.1
Hypothetical protein.
  
   
 0.740
AOH57008.1
Spore gernimation protein GerA.
 
   
 0.551
AOH57007.1
Spore gernimation protein GerB.
 
     0.542
AOH54896.1
Hypothetical protein.
  
     0.538
AOH57006.1
Hypothetical protein.
 
     0.529
AOH55542.1
Germination protein YpeB.
 
    0.524
AOH52817.1
Stage II sporulation protein E.
  
     0.483
AOH53819.1
Formate dehydrogenase.
  
     0.474
AOH55583.1
Stage V sporulation protein AB.
  
    0.457
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.