STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH57234.1Agmatinase; Belongs to the arginase family. (292 aa)    
Predicted Functional Partners:
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
 
 
 0.993
AOH54131.1
Arginine decarboxylase.
 
  
 0.959
AOH53503.1
Agmatinase; Belongs to the arginase family.
  
  
 
0.920
AOH55425.1
Agmatinase; Belongs to the arginase family.
  
  
 
0.920
AOH53210.1
Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 
  0.903
AOH55529.1
Putrescine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 
  0.903
AOH54730.1
GNAT family N-acetyltransferase.
     
  0.900
AOH56686.1
Spermidine acetyltransferase.
     
  0.900
AOH57236.1
Monofunctional biosynthetic peptidoglycan transglycosylase.
       0.501
AOH55672.1
Hypothetical protein.
   
    0.491
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.