STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRU_0426Sugar transporter, fucose:hydrogen symporter (FHS) family; Identified by similarity to SP:Q44623. (425 aa)    
Predicted Functional Partners:
galK
Galactokinase; Identified by similarity to SP:P39574; match to protein family HMM PF00288; match to protein family HMM PF08544; match to protein family HMM TIGR00131; Belongs to the GHMP kinase family. GalK subfamily.
  
  
 0.813
galM_2
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
    0.781
fucP
L-fucose permease; Identified by similarity to SP:P11551; match to protein family HMM PF07690; match to protein family HMM TIGR00885.
  
     0.543
PRU_0625
Transporter, outer membrane receptor (OMR) family; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
  
     0.519
folC
Tetrahydrofolate synthase; Identified by similarity to SP:Q05865; match to protein family HMM PF08245; match to protein family HMM TIGR01499; Belongs to the folylpolyglutamate synthase family.
       0.495
PRU_0810
Conserved hypothetical protein; Identified by similarity to GB:AAQ66361.1.
 
     0.480
galM_1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
    0.471
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
       0.467
PRU_2277
Sugar transporter, fucose:hydrogen symporter (FHS) family; Identified by similarity to SP:Q44623; match to protein family HMM PF07690.
  
     0.443
grpE
Co-chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depend [...]
  
    0.441
Your Current Organism:
Prevotella ruminicola
NCBI taxonomy Id: 264731
Other names: P. ruminicola 23, Prevotella ruminicola 23, Prevotella ruminicola Bryant 23, Prevotella ruminicola str. 23, Prevotella ruminicola strain 23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.