node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PRU_0539 | PRU_1701 | PRU_0539 | PRU_1701 | Conserved hypothetical protein; Identified by similarity to GB:AAQ66077.1. | Putative DNA polymerase III, delta prime subunit; Identified by similarity to SP:P37540. | 0.581 |
PRU_0539 | holA | PRU_0539 | PRU_0540 | Conserved hypothetical protein; Identified by similarity to GB:AAQ66077.1. | DNA polymerase III, delta subunit; Identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128. | 0.819 |
PRU_0539 | recO | PRU_0539 | PRU_2337 | Conserved hypothetical protein; Identified by similarity to GB:AAQ66077.1. | Putative DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.657 |
PRU_0838 | PRU_1188 | PRU_0838 | PRU_1188 | Putative DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929. | Exonuclease; Identified by match to protein family HMM PF00929. | 0.936 |
PRU_0838 | PRU_1701 | PRU_0838 | PRU_1701 | Putative DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929. | Putative DNA polymerase III, delta prime subunit; Identified by similarity to SP:P37540. | 0.951 |
PRU_0838 | PRU_2813 | PRU_0838 | PRU_2813 | Putative DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929. | Exonuclease; Identified by match to protein family HMM PF00929. | 0.936 |
PRU_0838 | dnaE | PRU_0838 | PRU_1896 | Putative DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929. | DNA polymerase III, alpha subunit; Identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594. | 0.943 |
PRU_0838 | dnaN | PRU_0838 | PRU_0839 | Putative DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.989 |
PRU_0838 | dnaX | PRU_0838 | PRU_1618 | Putative DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929. | DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.941 |
PRU_0838 | holA | PRU_0838 | PRU_0540 | Putative DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929. | DNA polymerase III, delta subunit; Identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128. | 0.948 |
PRU_0838 | polA | PRU_0838 | PRU_2485 | Putative DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.488 |
PRU_1188 | PRU_0838 | PRU_1188 | PRU_0838 | Exonuclease; Identified by match to protein family HMM PF00929. | Putative DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929. | 0.936 |
PRU_1188 | PRU_1701 | PRU_1188 | PRU_1701 | Exonuclease; Identified by match to protein family HMM PF00929. | Putative DNA polymerase III, delta prime subunit; Identified by similarity to SP:P37540. | 0.941 |
PRU_1188 | PRU_2813 | PRU_1188 | PRU_2813 | Exonuclease; Identified by match to protein family HMM PF00929. | Exonuclease; Identified by match to protein family HMM PF00929. | 0.900 |
PRU_1188 | dnaE | PRU_1188 | PRU_1896 | Exonuclease; Identified by match to protein family HMM PF00929. | DNA polymerase III, alpha subunit; Identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594. | 0.943 |
PRU_1188 | dnaN | PRU_1188 | PRU_0839 | Exonuclease; Identified by match to protein family HMM PF00929. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.946 |
PRU_1188 | dnaX | PRU_1188 | PRU_1618 | Exonuclease; Identified by match to protein family HMM PF00929. | DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.941 |
PRU_1188 | holA | PRU_1188 | PRU_0540 | Exonuclease; Identified by match to protein family HMM PF00929. | DNA polymerase III, delta subunit; Identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128. | 0.939 |
PRU_1188 | polA | PRU_1188 | PRU_2485 | Exonuclease; Identified by match to protein family HMM PF00929. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.488 |
PRU_1701 | PRU_0539 | PRU_1701 | PRU_0539 | Putative DNA polymerase III, delta prime subunit; Identified by similarity to SP:P37540. | Conserved hypothetical protein; Identified by similarity to GB:AAQ66077.1. | 0.581 |