STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
PRU_0789Putative N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF00041. (982 aa)    
Predicted Functional Partners:
PRU_0790
Identified by match to protein family HMM PF01553.
       0.824
PRU_0791
Conserved hypothetical protein; Identified by similarity to GB:AAO75368.1.
       0.813
PRU_0788
Conserved hypothetical protein; Identified by similarity to GB:AAO75363.1.
       0.799
PRU_0787
Conserved hypothetical protein; Identified by similarity to SP:Q8AB57; match to protein family HMM PF08497.
  
    0.752
PRU_1563
Glycosyltransferase, group 2 family; Identified by match to protein family HMM PF00535; match to protein family HMM PF08486; match to protein family HMM TIGR02669.
 
  
 0.729
PRU_0786
Conserved hypothetical protein; Identified by similarity to GB:AAT89226.1.
     
 0.709
PRU_0859
Peptidyl-prolyl cis-trans isomerase-like protein; Identified by similarity to GB:AAO79476.1.
 
   
 0.705
PRU_2755
Conserved hypothetical protein; Identified by match to protein family HMM PF01569.
 
     0.635
PRU_2326
Conserved hypothetical protein; Identified by similarity to GB:AAO78560.1.
  
     0.634
pfp
Diphosphate--fructose-6-phosphate 1-phosphotransferase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.
       0.618
Your Current Organism:
Prevotella ruminicola
NCBI taxonomy Id: 264731
Other names: P. ruminicola 23, Prevotella ruminicola 23, Prevotella ruminicola Bryant 23, Prevotella ruminicola str. 23, Prevotella ruminicola strain 23
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