STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRU_1027Conserved hypothetical protein; Identified by similarity to GB:AAO75422.1. (318 aa)    
Predicted Functional Partners:
PRU_1026
Conserved hypothetical protein; Identified by similarity to GB:AAQ66654.1.
 
     0.836
PRU_1560
Putative membrane protein; Identified by similarity to GB:AAO76628.1.
  
     0.750
nrdG_1
Anaerobic ribonucleoside-triphosphate reductase activating protein; Identified by similarity to GB:AAP95362.1; match to protein family HMM TIGR02826.
  
     0.736
PRU_2122
Conserved hypothetical protein; Identified by similarity to GB:AAO75181.1.
  
     0.696
nrdD_1
Anaerobic ribonucleoside-triphosphate reductase; Identified by similarity to SP:P28903; match to protein family HMM PF03477; match to protein family HMM TIGR02827.
  
     0.687
PRU_0458
Conserved hypothetical protein; Identified by similarity to GB:AAO76548.1.
  
     0.680
PRU_1359
Conserved hypothetical protein; Identified by similarity to GB:BAD48392.1.
  
     0.674
PRU_2326
Conserved hypothetical protein; Identified by similarity to GB:AAO78560.1.
  
     0.671
PRU_2918
Putative lipoprotein.
  
     0.667
PRU_2619
Conserved hypothetical protein; Identified by similarity to GB:AAO78503.1.
  
     0.655
Your Current Organism:
Prevotella ruminicola
NCBI taxonomy Id: 264731
Other names: P. ruminicola 23, Prevotella ruminicola 23, Prevotella ruminicola Bryant 23, Prevotella ruminicola str. 23, Prevotella ruminicola strain 23
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.