STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cutCPutative copper homeostasis protein; Participates in the control of copper homeostasis. Belongs to the CutC family. (223 aa)    
Predicted Functional Partners:
PRU_1166
DS domain protein; Identified by similarity to GB:AAS19690.1; match to protein family HMM PF00754.
 
   
 0.742
PRU_1157
beta-N-acetylhexosaminidase; Identified by similarity to SP:P49008; match to protein family HMM PF00728; match to protein family HMM PF07691.
 
     0.654
PRU_1164
Identified by match to protein family HMM PF01120.
 
   
 0.643
PRU_1156
Glycosyl hydrolase, family 20; Identified by match to protein family HMM PF00728.
 
     0.623
PRU_1168
Identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180.
       0.609
PRU_1167
Identified by match to protein family HMM PF00933; match to protein family HMM PF01915; Belongs to the glycosyl hydrolase 3 family.
       0.603
PRU_1165
Identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180.
       0.593
PRU_1170
Identified by match to protein family HMM PF01841.
     0.531
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
    0.448
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily.
 
   
 0.422
Your Current Organism:
Prevotella ruminicola
NCBI taxonomy Id: 264731
Other names: P. ruminicola 23, Prevotella ruminicola 23, Prevotella ruminicola Bryant 23, Prevotella ruminicola str. 23, Prevotella ruminicola strain 23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.