Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene fusions
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PRU_1202Sodium transporter, NhaD sodium:hydrogen antiporter (NhaD) family; Identified by similarity to GB:BAA25994.1; match to protein family HMM PF03600. (463 aa)    
Predicted Functional Partners:
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
       0.783
PRU_1203
Sensor histidine kinase; Identified by match to protein family HMM PF00497; match to protein family HMM PF00512; match to protein family HMM PF02518.
  
    0.752
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
       0.506
PRU_1204
DnaJ-like protein DjlA; Identified by similarity to SP:Q45885; match to protein family HMM PF00226.
     
 0.503
maf
Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.501
PRU_1200
Conserved hypothetical protein; Identified by similarity to GB:AAK92870.1.
       0.468
PRU_1198
ATP synthase F1, epsilon subunit; Identified by similarity to SP:P35111; match to protein family HMM PF02823.
     
 0.466
kdsC
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Identified by similarity to SP:P45396; match to protein family HMM TIGR01670.
       0.425
atpB
ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
  
    0.422
Your Current Organism:
Prevotella ruminicola
NCBI taxonomy Id: 264731
Other names: P. ruminicola 23, Prevotella ruminicola 23, Prevotella ruminicola Bryant 23, Prevotella ruminicola str. 23, Prevotella ruminicola strain 23
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