STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pipProlyl aminopeptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family. (290 aa)    
Predicted Functional Partners:
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
  
 
 0.907
PRU_1314
Conserved hypothetical protein; Identified by similarity to GB:AAO75934.1; match to protein family HMM PF05036.
       0.773
PRU_1315
FHA domain protein; Identified by match to protein family HMM PF00498.
       0.773
PRU_1317
Identified by match to protein family HMM PF00753.
       0.773
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.651
PRU_1313
UDP-glucose 6-dehydrogenase; Identified by similarity to SP:O32271; match to protein family HMM PF00984; match to protein family HMM PF01210; match to protein family HMM PF02737; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026.
  
  
 0.583
PRU_1318
Nucleotidyltransferase domain protein; Identified by match to protein family HMM PF01909.
  
    0.576
PRU_1319
Conserved hypothetical protein; Identified by similarity to PIR:B72307; match to protein family HMM PF05168.
       0.563
PRU_1312
Putative lipoprotein; Identified by similarity to GB:AAO75937.1.
       0.552
PRU_2034
acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.
  
 0.506
Your Current Organism:
Prevotella ruminicola
NCBI taxonomy Id: 264731
Other names: P. ruminicola 23, Prevotella ruminicola 23, Prevotella ruminicola Bryant 23, Prevotella ruminicola str. 23, Prevotella ruminicola strain 23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.