STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRU_2007Calcium-translocating P-type ATPase, PMCA-type; Identified by similarity to GB:AAC28745.1; match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM PF08282; match to protein family HMM TIGR01494; match to protein family HMM TIGR01517. (969 aa)    
Predicted Functional Partners:
PRU_2006
Conserved domain protein; Identified by similarity to GB:BAB48374.1.
       0.770
PRU_2657
Identified by match to protein family HMM PF02308.
  
 
 0.509
PRU_0051
Cation transporter, monovalent cation:proton antiporter-2 (CPA2) family; Identified by similarity to SP:P26235; match to protein family HMM PF00999.
 
 
 0.506
pgk
Phosphoglycerate kinase; Identified by match to protein family HMM PF00162; Belongs to the phosphoglycerate kinase family.
  
 
 0.498
PRU_1114
Mobilization protein; Identified by similarity to GB:AAA98401.1; match to protein family HMM PF03432.
 
 
 
 0.456
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 
 0.454
PRU_0515
Peptidase, C13 family; Identified by match to protein family HMM PF01650.
  
     0.449
PRU_0169
Peptidase, S8A (subtilisin) family; Identified by match to protein family HMM PF00082.
   
 
 0.440
PRU_0257
Cation transporter, monovalent cation:proton antiporter-2 (CPA2) family; Identified by match to protein family HMM PF00999; match to protein family HMM PF02080.
 
 
 0.430
PRU_1859
Putative membrane protein; Identified by similarity to GB:AAQ65806.1; match to protein family HMM PF07681.
   
  0.424
Your Current Organism:
Prevotella ruminicola
NCBI taxonomy Id: 264731
Other names: P. ruminicola 23, Prevotella ruminicola 23, Prevotella ruminicola Bryant 23, Prevotella ruminicola str. 23, Prevotella ruminicola strain 23
Server load: medium (42%) [HD]