STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRU_2181Glycosyl hydrolase, family 38/DS domain protein; Identified by match to protein family HMM PF00754; match to protein family HMM PF01074; match to protein family HMM PF07748; match to protein family HMM PF09261. (1193 aa)    
Predicted Functional Partners:
PRU_2182
Identified by similarity to SP:Q9F234; match to protein family HMM PF01055; Belongs to the glycosyl hydrolase 31 family.
     
 0.585
PRU_2184
Glycosyl hydrolase, family 31; Identified by match to protein family HMM PF01055; Belongs to the glycosyl hydrolase 31 family.
 
   
 0.566
PRU_1696
Identified by match to protein family HMM PF02595; match to protein family HMM TIGR00045; Belongs to the glycerate kinase type-1 family.
    
 0.545
PRU_2183
Conserved domain protein; Identified by similarity to GB:AAO78194.1.
       0.485
galK
Galactokinase; Identified by similarity to SP:P39574; match to protein family HMM PF00288; match to protein family HMM PF08544; match to protein family HMM TIGR00131; Belongs to the GHMP kinase family. GalK subfamily.
  
    0.417
Your Current Organism:
Prevotella ruminicola
NCBI taxonomy Id: 264731
Other names: P. ruminicola 23, Prevotella ruminicola 23, Prevotella ruminicola Bryant 23, Prevotella ruminicola str. 23, Prevotella ruminicola strain 23
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.