STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRU_2182Identified by similarity to SP:Q9F234; match to protein family HMM PF01055; Belongs to the glycosyl hydrolase 31 family. (707 aa)    
Predicted Functional Partners:
PRU_2514
Putative alpha-galactosidase; Identified by similarity to GB:AAD23585.1; match to protein family HMM PF02065.
 
  
 0.920
PRU_2685
Identified by match to protein family HMM PF00128.
 
 
 0.918
PRU_1371
Putative 4-alpha-glucanotransferase; Identified by similarity to GB:AAR99599.1; match to protein family HMM PF00686; match to protein family HMM PF02446.
    
 0.905
PRU_1659
Glycosyl hydrolase, family 57; Identified by match to protein family HMM PF03065.
    
 0.905
PRU_2278
Putative fructokinase; Identified by similarity to SP:P26984; match to protein family HMM PF00294.
  
 
 0.905
PRU_2638
Kinase, pfkB family; Identified by match to protein family HMM PF00294.
  
 
 0.905
PRU_2751
Putative 4-alpha-glucanotransferase; Identified by similarity to GB:AAR99599.1; match to protein family HMM PF02446.
    
 0.905
PRU_2275
Glycosyl hydrolase, family 32; Identified by match to protein family HMM PF00251.
   
 
 0.904
PRU_0153
Cellobiose phosphorylase; Identified by similarity to GB:AAB95491.2; match to protein family HMM PF06165; match to protein family HMM PF06204; match to protein family HMM PF06205.
     
 0.902
PRU_0270
Alpha-glucosidase family protein; Identified by similarity to GB:AAC44671.1.
  
 
  0.902
Your Current Organism:
Prevotella ruminicola
NCBI taxonomy Id: 264731
Other names: P. ruminicola 23, Prevotella ruminicola 23, Prevotella ruminicola Bryant 23, Prevotella ruminicola str. 23, Prevotella ruminicola strain 23
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.