STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRU_2276Fructan beta-(2,6)-fructosidase; Identified by similarity to GB:AAA22924.1; match to protein family HMM PF00251; match to protein family HMM PF08244; Belongs to the glycosyl hydrolase 32 family. (552 aa)    
Predicted Functional Partners:
PRU_2278
Putative fructokinase; Identified by similarity to SP:P26984; match to protein family HMM PF00294.
 
 
 0.982
PRU_2638
Kinase, pfkB family; Identified by match to protein family HMM PF00294.
 
 
 0.925
PRU_2273
Putative lipoprotein; Identified by match to protein family HMM PF07980.
 
 
 0.848
PRU_0129
Putative kinase; Identified by match to protein family HMM PF00288; match to protein family HMM PF07959; match to protein family HMM PF08544.
     
  0.800
PRU_2275
Glycosyl hydrolase, family 32; Identified by match to protein family HMM PF00251.
 
  
 0.791
PRU_2277
Sugar transporter, fucose:hydrogen symporter (FHS) family; Identified by similarity to SP:Q44623; match to protein family HMM PF07690.
 
  
 0.768
PRU_2274
Putative lipoprotein.
  
 
 0.725
PRU_2272
Conserved hypothetical protein; Identified by similarity to GB:AAO76870.1; match to protein family HMM PF00593; match to protein family HMM PF07715.
 
     0.618
PRU_2271
Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF00532.
 
  
 0.601
PRU_0901
Putative low molecular weight phosphotyrosine protein phosphatase; Identified by similarity to SP:P24666; match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
 0.415
Your Current Organism:
Prevotella ruminicola
NCBI taxonomy Id: 264731
Other names: P. ruminicola 23, Prevotella ruminicola 23, Prevotella ruminicola Bryant 23, Prevotella ruminicola str. 23, Prevotella ruminicola strain 23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.