STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PRU_2702Glycosyl hydrolase, family 43; Identified by match to protein family HMM PF04616. (700 aa)    
Predicted Functional Partners:
PRU_2701
Glycosyl hydrolase, family 43; Identified by match to protein family HMM PF04616; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.886
PRU_1864
Glycosyl hydrolase, family 43; Identified by match to protein family HMM PF04616; Belongs to the glycosyl hydrolase 43 family.
     0.777
xyn10D-fae1A
Glycosyl hydrolase, family 10/isoamylase domain/esterase family protein; Involved in degradation of plant cell wall polysaccharides. Has endo-xylanase activity towards substrates such as oat spelt xylan (OSX), acetylated xylo-oligosaccharides and acetylated xylan, producing primarily xylobiose; cannot hydrolyze xylobiose to xylose. Also has feruloyl esterase activity, releasing ferulic acid from methylferulate, and from the more natural substrates wheat bran, corn fiber, and XOS(FA,Ac), a corn fiber-derived substrate enriched in O-acetyl and ferulic acid esters. Exhibits negligible ace [...]
 
   
 0.774
PRU_1268
Glycosyl hydrolase, family 8; Identified by match to protein family HMM PF01270.
  
 0.751
PRU_2733
Conserved hypothetical protein; Identified by similarity to GB:AAM39029.1.
 
     0.746
PRU_0081
Putative alpha-glucuronidase; Identified by similarity to SP:P96105.
 
   
 0.741
PRU_2516
Cellulase; Identified by similarity to SP:P17901; match to protein family HMM PF00150; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
   
 0.728
PRU_2674
Glycosyl hydrolase, family 43; Identified by match to protein family HMM PF04616.
 
     0.726
PRU_1242
Glycosyl hydrolase, family 10; Identified by match to protein family HMM PF00331.
 
   
 0.725
PRU_2747
Conserved domain protein.
 
   
 0.677
Your Current Organism:
Prevotella ruminicola
NCBI taxonomy Id: 264731
Other names: P. ruminicola 23, Prevotella ruminicola 23, Prevotella ruminicola Bryant 23, Prevotella ruminicola str. 23, Prevotella ruminicola strain 23
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