STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRU_2879Conserved hypothetical protein. (332 aa)    
Predicted Functional Partners:
PRU_0859
Peptidyl-prolyl cis-trans isomerase-like protein; Identified by similarity to GB:AAO79476.1.
  
     0.758
PRU_1615
Putative lipoprotein; Identified by similarity to GB:AAO75346.1.
  
     0.745
PRU_2121
Conserved hypothetical protein; Identified by similarity to GB:AAO75164.1.
  
     0.742
PRU_2619
Conserved hypothetical protein; Identified by similarity to GB:AAO78503.1.
  
     0.741
PRU_0458
Conserved hypothetical protein; Identified by similarity to GB:AAO76548.1.
  
     0.733
PRU_1026
Conserved hypothetical protein; Identified by similarity to GB:AAQ66654.1.
  
     0.698
PRU_2755
Conserved hypothetical protein; Identified by match to protein family HMM PF01569.
  
     0.692
PRU_2123
Conserved hypothetical protein; Identified by similarity to GB:AAO75166.1.
  
     0.679
PRU_2124
Conserved hypothetical protein; Identified by similarity to GB:AAO75165.1.
  
     0.651
PRU_2169
Conserved hypothetical protein; Identified by similarity to GB:AAO76681.1.
  
     0.650
Your Current Organism:
Prevotella ruminicola
NCBI taxonomy Id: 264731
Other names: P. ruminicola 23, Prevotella ruminicola 23, Prevotella ruminicola Bryant 23, Prevotella ruminicola str. 23, Prevotella ruminicola strain 23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.