Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Moth_0484YcfA-like protein. (78 aa)    
Predicted Functional Partners:
Moth_0483
Protein of unknown function UPF0150.
 
 
 
 0.972
Moth_0298
YcfA-like protein.
  
     0.681
Moth_0167
Protein of unknown function UPF0150.
 
 
 
 0.676
Moth_0170
Hypothetical protein.
  
     0.669
Moth_0299
Protein of unknown function UPF0150.
 
 
 
 0.660
Moth_0249
Protein of unknown function UPF0150.
 
 
 
 0.653
Moth_1797
Protein of unknown function UPF0150.
 
 
 
 0.643
Moth_1799
Conserved hypothetical protein.
  
     0.561
Moth_0169
Protein of unknown function DUF433.
  
     0.551
Moth_1571
Hypothetical protein.
  
     0.547
Your Current Organism:
Moorella thermoacetica
NCBI taxonomy Id: 264732
Other names: M. thermoacetica ATCC 39073, Moorella thermoacetica ATCC 39073, Moorella thermoacetica str. ATCC 39073, Moorella thermoacetica strain ATCC 39073
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