STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Moth_1125Protein of unknown function DUF6, transmembrane. (294 aa)    
Predicted Functional Partners:
Moth_1126
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-.
 
   
 0.712
Moth_1127
Amino acid ABC transporter membrane protein, PAAT family; TC 3.A.1.3.-.
 
    0.676
Moth_1128
Amino acid ABC transporter ATP-binding protein, PAAT family; TC 3.A.1.3.-.
 
     0.593
Moth_2311
Protein of unknown function DUF6, transmembrane.
  
     0.535
nfo
Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic (AP) sites, generating a 3'-hydroxyl group and a 5'-terminal sugar phosphate.
  
    0.522
Moth_1849
Protein of unknown function DUF6, transmembrane.
  
     0.417
Your Current Organism:
Moorella thermoacetica
NCBI taxonomy Id: 264732
Other names: M. thermoacetica ATCC 39073, Moorella thermoacetica ATCC 39073, Moorella thermoacetica str. ATCC 39073, Moorella thermoacetica strain ATCC 39073
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.