STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Moth_1271Peptidoglycan-binding LysM. (307 aa)    
Predicted Functional Partners:
Moth_0063
Glycoside hydrolase, family 18.
 
      0.899
Moth_1057
Polysaccharide deacetylase.
 
    
 0.882
Moth_0040
Polysaccharide deacetylase.
 
    
 0.851
Moth_0739
Polysaccharide deacetylase.
 
    
 0.823
Moth_0101
ErfK/YbiS/YcfS/YnhG.
    
 0.822
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
 0.742
cinA
Competence/damage-inducible protein cinA; Belongs to the CinA family.
  
 
  0.733
Moth_0517
N-acetylmuramoyl-L-alanine amidase.
    
 0.653
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.649
Moth_1272
N-acetylmuramoyl-L-alanine amidase.
    
 0.487
Your Current Organism:
Moorella thermoacetica
NCBI taxonomy Id: 264732
Other names: M. thermoacetica ATCC 39073, Moorella thermoacetica ATCC 39073, Moorella thermoacetica str. ATCC 39073, Moorella thermoacetica strain ATCC 39073
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