STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Moth_1471Diguanylate cyclase (GGDEF domain). (439 aa)    
Predicted Functional Partners:
Moth_2492
Metal dependent phosphohydrolase.
 
  0.964
Moth_0504
Metal dependent phosphohydrolase.
 
  0.962
Moth_1432
Metal dependent phosphohydrolase.
 
  0.960
Moth_1470
Metal dependent phosphohydrolase.
 
 0.954
Moth_2131
Metal dependent phosphohydrolase.
 
  0.941
Moth_1469
Metal dependent phosphohydrolase.
 
  0.939
Moth_1473
Putative anti-sigma regulatory factor (serine/threonine protein kinase).
  
   0.925
Moth_0070
Two component transcriptional regulator, winged helix family.
 
 
 
 0.911
Moth_1131
Two component transcriptional regulator, winged helix family.
 
 
 
 0.911
Moth_0346
Diguanylate phosphodiesterase (EAL domain).
 
 0.903
Your Current Organism:
Moorella thermoacetica
NCBI taxonomy Id: 264732
Other names: M. thermoacetica ATCC 39073, Moorella thermoacetica ATCC 39073, Moorella thermoacetica str. ATCC 39073, Moorella thermoacetica strain ATCC 39073
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