STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Moth_1735Iron-only hydrogenase maturation protein HydE. (350 aa)    
Predicted Functional Partners:
Moth_1277
Iron-only hydrogenase maturation protein HydF.
   
 0.989
birA
Biotin--acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
 
 0.969
Moth_1736
Conserved hypothetical protein.
 
  
 0.962
Moth_1717
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
 
  
 0.873
Moth_1734
Iron-only hydrogenase maturation protein HydG.
 
  
0.809
Moth_1883
Ferredoxin hydrogenase.
 
  
 0.804
Moth_0753
Protein of unknown function DUF201.
  
 
 0.760
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
 0.759
Moth_0457
Glutamate 2,3-aminomutase.
    
 0.739
Moth_0144
BioY protein.
  
  
 0.649
Your Current Organism:
Moorella thermoacetica
NCBI taxonomy Id: 264732
Other names: M. thermoacetica ATCC 39073, Moorella thermoacetica ATCC 39073, Moorella thermoacetica str. ATCC 39073, Moorella thermoacetica strain ATCC 39073
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