STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Moth_1964Transcriptional regulator, LytR/AlgR family. (255 aa)    
Predicted Functional Partners:
Moth_1965
Histidine kinase internal region.
 0.985
Moth_2171
ATP-binding region, ATPase-like protein.
 0.939
Moth_2114
Histidine kinase.
 
 0.874
Moth_1963
Carbon starvation protein CstA.
 
   
 0.586
Moth_0904
Signal transduction histidine kinase regulating citrate/malate metabolism.
  
 
 0.443
Moth_1579
Signal transduction histidine kinase regulating citrate/malate metabolism.
  
 
 0.443
Moth_1622
Signal transduction histidine kinase regulating citrate/malate metabolism.
  
 
 0.443
Moth_1966
5-oxoprolinase (ATP-hydrolyzing).
       0.420
Moth_1967
5-oxoprolinase (ATP-hydrolyzing).
       0.420
Moth_1138
Histidine kinase.
  
 
 0.400
Your Current Organism:
Moorella thermoacetica
NCBI taxonomy Id: 264732
Other names: M. thermoacetica ATCC 39073, Moorella thermoacetica ATCC 39073, Moorella thermoacetica str. ATCC 39073, Moorella thermoacetica strain ATCC 39073
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