STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Moth_2004Transcriptional regulator, MerR family. (178 aa)    
Predicted Functional Partners:
Moth_0669
Undecaprenyl-phosphate galactosephosphotransferase.
  
 
 0.992
Moth_1925
Nucleotidyltransferase.
  
 
 0.965
Moth_1897
Cupin region.
  
 0.778
Moth_2019
Cupin region.
  
 0.778
nadE
NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.774
Moth_2005
Predicted sulfurylase small subunit, molybdopterin cytosine dinucleotide biosynthesis.
       0.773
Moth_0421
Transcriptional regulator, MarR family.
  
 0.768
Moth_2158
[SSU ribosomal protein S18P]-alanine acetyltransferase.
  
 
 0.748
Moth_2003
Uncharacterized MobA-related protein-like protein.
       0.727
Moth_0751
NAD-dependent epimerase/dehydratase.
  
 
 0.726
Your Current Organism:
Moorella thermoacetica
NCBI taxonomy Id: 264732
Other names: M. thermoacetica ATCC 39073, Moorella thermoacetica ATCC 39073, Moorella thermoacetica str. ATCC 39073, Moorella thermoacetica strain ATCC 39073
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