Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Moth_0320 | Moth_0343 | Conserved hypothetical protein. | Hypothetical protein. | 0.736 |
Moth_0320 | Moth_1004 | Conserved hypothetical protein. | Copper amine oxidase-like protein. | 0.738 |
Moth_0320 | Moth_1253 | Conserved hypothetical protein. | O-antigen polymerase. | 0.727 |
Moth_0320 | Moth_1917 | Conserved hypothetical protein. | Hypothetical protein. | 0.639 |
Moth_0320 | Moth_2083 | Conserved hypothetical protein. | Copper amine oxidase-like protein. | 0.596 |
Moth_0320 | Moth_2138 | Conserved hypothetical protein. | Hypothetical protein. | 0.649 |
Moth_0320 | Moth_2139 | Conserved hypothetical protein. | Beta-mannanase-like protein; Belongs to the glycosyl hydrolase 26 family. | 0.587 |
Moth_0320 | Moth_2343 | Conserved hypothetical protein. | Copper amine oxidase-like protein. | 0.474 |
Moth_0343 | Moth_0320 | Hypothetical protein. | Conserved hypothetical protein. | 0.736 |
Moth_0343 | Moth_1004 | Hypothetical protein. | Copper amine oxidase-like protein. | 0.661 |
Moth_0343 | Moth_1012 | Hypothetical protein. | Spore germination protein. | 0.748 |
Moth_0343 | Moth_1253 | Hypothetical protein. | O-antigen polymerase. | 0.568 |
Moth_0343 | Moth_1917 | Hypothetical protein. | Hypothetical protein. | 0.771 |
Moth_0343 | Moth_2083 | Hypothetical protein. | Copper amine oxidase-like protein. | 0.582 |
Moth_0343 | Moth_2139 | Hypothetical protein. | Beta-mannanase-like protein; Belongs to the glycosyl hydrolase 26 family. | 0.743 |
Moth_1004 | Moth_0320 | Copper amine oxidase-like protein. | Conserved hypothetical protein. | 0.738 |
Moth_1004 | Moth_0343 | Copper amine oxidase-like protein. | Hypothetical protein. | 0.661 |
Moth_1004 | Moth_1253 | Copper amine oxidase-like protein. | O-antigen polymerase. | 0.786 |
Moth_1004 | Moth_1917 | Copper amine oxidase-like protein. | Hypothetical protein. | 0.505 |
Moth_1004 | Moth_2083 | Copper amine oxidase-like protein. | Copper amine oxidase-like protein. | 0.774 |
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