STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A443HIA9CwfJ C-terminus 1-domain-containing protein-like protein. (554 aa)    
Predicted Functional Partners:
A0A443HSG2
Pre-mRNA splicing factor component-domain-containing protein.
   
 
 0.935
A0A443HSD9
RNA lariat debranching enzyme.
   
 
 0.746
A0A443I1F0
Small nuclear ribonucleo protein U2, A.
    
   0.556
A0A443HMY5
SYF2 splicing factor-domain-containing protein.
    
   0.465
A0A443I827
WD40-repeat-containing domain protein.
   
 
 0.448
A0A443HNE9
Vesicle transport v-snare protein vti1homolog.
   
    0.414
Your Current Organism:
Byssochlamys spectabilis
NCBI taxonomy Id: 264951
Other names: ATCC 90900, B. spectabilis, Byssochlamys spectabilis (Udagawa & Shoji Suzuki) Houbraken & Samson 2008, CBS 101075, FRR 5219, JCM 12815, Pacilomyces variotii, Paecilomyces spectabilis, Paecilomyces variotii, Paecilomyces variotti, Paecilomyces vatiotii, Talaromyces spectabilis
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