STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A443HQQ760S ribosomal protein L16-B; Belongs to the universal ribosomal protein uL13 family. (202 aa)    
Predicted Functional Partners:
A0A443HH89
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 0.999
A0A443HI11
60S ribosomal protein L26.
  
 0.999
A0A443HID3
60S ribosomal protein L7.
  
 0.999
A0A443HII5
60S ribosomal protein L5.
  
 0.999
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.999
A0A443HIU5
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
  
 0.999
A0A443HKL9
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 0.999
A0A443HKU5
Putative 60S ribosomal protein L2.
  
 0.999
A0A443HL00
Ribosomal protein L39e.
  
 0.999
A0A443HLD8
Putative 40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 0.999
Your Current Organism:
Byssochlamys spectabilis
NCBI taxonomy Id: 264951
Other names: ATCC 90900, B. spectabilis, Byssochlamys spectabilis (Udagawa & Shoji Suzuki) Houbraken & Samson 2008, CBS 101075, FRR 5219, JCM 12815, Pacilomyces variotii, Paecilomyces spectabilis, Paecilomyces variotii, Paecilomyces variotti, Paecilomyces vatiotii, Talaromyces spectabilis
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