STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A443HRG7Uncharacterized protein. (504 aa)    
Predicted Functional Partners:
A0A443HXQ0
Exoribonuclease complex, subunit Rrp45.
   
 0.999
A0A443HYL5
Ribosomal protein S5 domain 2-type protein.
   
 0.999
A0A443I341
Ribosomal protein S5 domain 2-type protein.
  
 0.999
A0A443I487
Exosome complex exonuclease Rrp4.
   
 0.999
A0A443I8B0
KH_dom_type_1 domain-containing protein.
  
 0.999
A0A443I4E8
Putative exosome-associated protein.
   
 0.997
A0A443HZS1
Putative ATP dependent RNA helicase.
   
 0.996
A0A443HQ38
3' exoribonuclease family, domain 1-domain-containing protein.
   
 0.982
A0A443HTK1
Exoribonuclease complex, subunit Rrp41.
   
 0.982
A0A443I126
Sec2p domain-containing protein.
   
 0.978
Your Current Organism:
Byssochlamys spectabilis
NCBI taxonomy Id: 264951
Other names: ATCC 90900, B. spectabilis, Byssochlamys spectabilis (Udagawa & Shoji Suzuki) Houbraken & Samson 2008, CBS 101075, FRR 5219, JCM 12815, Pacilomyces variotii, Paecilomyces spectabilis, Paecilomyces variotii, Paecilomyces variotti, Paecilomyces vatiotii, Talaromyces spectabilis
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