Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A443HHM1 | A0A443HIR6 | WD40-repeat-containing domain protein. | Dead box ATP-dependent rna helicase; Belongs to the DEAD box helicase family. | 0.919 |
A0A443HHM1 | A0A443HK37 | WD40-repeat-containing domain protein. | RNA helicase. | 0.971 |
A0A443HHM1 | A0A443HM40 | WD40-repeat-containing domain protein. | Uncharacterized protein. | 0.978 |
A0A443HHM1 | A0A443HS06 | WD40-repeat-containing domain protein. | Uncharacterized protein. | 0.961 |
A0A443HHM1 | A0A443HUV9 | WD40-repeat-containing domain protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
A0A443HHM1 | A0A443HZF6 | WD40-repeat-containing domain protein. | Putative rRNA maturation protein. | 0.998 |
A0A443HHM1 | A0A443I062 | WD40-repeat-containing domain protein. | U3 small nucleolar RNA-associated protein 6-domain-containing protein. | 0.999 |
A0A443HHM1 | A0A443I1C5 | WD40-repeat-containing domain protein. | NUC153 domain-containing protein. | 0.987 |
A0A443HHM1 | A0A443I6B9 | WD40-repeat-containing domain protein. | Putative rRNA processing protein Bystin. | 0.998 |
A0A443HHM1 | A0A443I6L7 | WD40-repeat-containing domain protein. | U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. | 0.942 |
A0A443HIR6 | A0A443HHM1 | Dead box ATP-dependent rna helicase; Belongs to the DEAD box helicase family. | WD40-repeat-containing domain protein. | 0.919 |
A0A443HIR6 | A0A443HK37 | Dead box ATP-dependent rna helicase; Belongs to the DEAD box helicase family. | RNA helicase. | 0.644 |
A0A443HIR6 | A0A443HM40 | Dead box ATP-dependent rna helicase; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.854 |
A0A443HIR6 | A0A443HS06 | Dead box ATP-dependent rna helicase; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.976 |
A0A443HIR6 | A0A443HUV9 | Dead box ATP-dependent rna helicase; Belongs to the DEAD box helicase family. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.991 |
A0A443HIR6 | A0A443HZF6 | Dead box ATP-dependent rna helicase; Belongs to the DEAD box helicase family. | Putative rRNA maturation protein. | 0.991 |
A0A443HIR6 | A0A443I062 | Dead box ATP-dependent rna helicase; Belongs to the DEAD box helicase family. | U3 small nucleolar RNA-associated protein 6-domain-containing protein. | 0.511 |
A0A443HIR6 | A0A443I1C5 | Dead box ATP-dependent rna helicase; Belongs to the DEAD box helicase family. | NUC153 domain-containing protein. | 0.743 |
A0A443HIR6 | A0A443I6B9 | Dead box ATP-dependent rna helicase; Belongs to the DEAD box helicase family. | Putative rRNA processing protein Bystin. | 0.948 |
A0A443HIR6 | A0A443I6L7 | Dead box ATP-dependent rna helicase; Belongs to the DEAD box helicase family. | U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. | 0.993 |
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