STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A443HS06Uncharacterized protein. (345 aa)    
Predicted Functional Partners:
A0A443HM40
Uncharacterized protein.
   
 
 0.989
A0A443HIR6
Dead box ATP-dependent rna helicase; Belongs to the DEAD box helicase family.
   
 
 0.976
A0A443HK37
RNA helicase.
   
 
 0.974
A0A443HUV9
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.974
A0A443I1C5
NUC153 domain-containing protein.
   
 
 0.973
A0A443I6L7
U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.
   
 
 0.973
A0A443I6B9
Putative rRNA processing protein Bystin.
   
 
 0.971
A0A443HZF6
Putative rRNA maturation protein.
   
 
 0.967
A0A443HHM1
WD40-repeat-containing domain protein.
   
 
 0.961
A0A443I062
U3 small nucleolar RNA-associated protein 6-domain-containing protein.
   
 
 0.960
Your Current Organism:
Byssochlamys spectabilis
NCBI taxonomy Id: 264951
Other names: ATCC 90900, B. spectabilis, Byssochlamys spectabilis (Udagawa & Shoji Suzuki) Houbraken & Samson 2008, CBS 101075, FRR 5219, JCM 12815, Pacilomyces variotii, Paecilomyces spectabilis, Paecilomyces variotii, Paecilomyces variotti, Paecilomyces vatiotii, Talaromyces spectabilis
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