STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A443HTU7Putative splicing factor 3B subunit 1. (1244 aa)    
Predicted Functional Partners:
A0A443HHL5
Putative pre-mRNA branch site protein p14.
   
 0.999
A0A443HJ29
Splicing factor 3b.
   
 0.999
A0A443HLB8
Pre-mRNA-splicing factor rse1.
   
 0.999
A0A443HLW3
Splicing factor 3b subunit 4.
    
 0.999
A0A443HQA6
Splicing factor subunit; Belongs to the SF3B5 family.
    
 0.998
A0A443HS42
Putative Pre-mRNA splicing factor ini1.
   
 0.998
A0A443HPL2
Pre-mRNA-processing ATP-dependent RNA helicase prp5.
   
 0.996
A0A443I1F0
Small nuclear ribonucleo protein U2, A.
   
 0.996
A0A443I638
Putative splicing factor 3a subunit 2.
    
 0.996
A0A443HT78
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
 
 
 
 0.995
Your Current Organism:
Byssochlamys spectabilis
NCBI taxonomy Id: 264951
Other names: ATCC 90900, B. spectabilis, Byssochlamys spectabilis (Udagawa & Shoji Suzuki) Houbraken & Samson 2008, CBS 101075, FRR 5219, JCM 12815, Pacilomyces variotii, Paecilomyces spectabilis, Paecilomyces variotii, Paecilomyces variotti, Paecilomyces vatiotii, Talaromyces spectabilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.