STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A443HUD7Uracil phosphoribosyltransferase. (192 aa)    
Predicted Functional Partners:
A0A443HUE2
Uracil phosphoribosyltransferase.
 
     0.951
niaD
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
  0.779
A0A443I5G9
Putative RNA polymerase I and III transcription factor complex component Tbp.
    
 0.713
A0A443HMS2
Serine/threonine-protein kinase KIN28; Belongs to the protein kinase superfamily.
    
 0.685
A0A443HLS9
SprT-like family-domain-containing protein.
    
 0.682
A0A443I1X4
CDK-activating kinase assembly factor MAT1.
    
 0.632
A0A443HT61
RNA polymerase I-specific transcription initiation factor RRN3 superfamily.
    
 0.628
A0A443HX84
Type I phosphodiesterase/nucleotide pyrophosphatase.
     
 0.617
A0A443I8C7
Cyclin Ccl1; Belongs to the cyclin family.
    
  0.594
A0A443I814
RNA polymerase II transcription initiation.
    
  0.592
Your Current Organism:
Byssochlamys spectabilis
NCBI taxonomy Id: 264951
Other names: ATCC 90900, B. spectabilis, Byssochlamys spectabilis (Udagawa & Shoji Suzuki) Houbraken & Samson 2008, CBS 101075, FRR 5219, JCM 12815, Pacilomyces variotii, Paecilomyces spectabilis, Paecilomyces variotii, Paecilomyces variotti, Paecilomyces vatiotii, Talaromyces spectabilis
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