Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A443HK09 | A0A443HLI3 | Uncharacterized protein. | Homeobox KN domain-containing protein. | 0.653 |
A0A443HK09 | A0A443HYR5 | Uncharacterized protein. | MADS-box domain-containing protein. | 0.774 |
A0A443HK09 | A0A443I5Y1 | Uncharacterized protein. | Putative homeobox transcription factor. | 0.677 |
A0A443HLI3 | A0A443HK09 | Homeobox KN domain-containing protein. | Uncharacterized protein. | 0.653 |
A0A443HLI3 | A0A443HYR5 | Homeobox KN domain-containing protein. | MADS-box domain-containing protein. | 0.584 |
A0A443HLI3 | A0A443I5Y1 | Homeobox KN domain-containing protein. | Putative homeobox transcription factor. | 0.677 |
A0A443HTP6 | A0A443HYN0 | GATA factor AREB beta. | GATA transcriptional activator area. | 0.747 |
A0A443HTP6 | A0A443HYR5 | GATA factor AREB beta. | MADS-box domain-containing protein. | 0.672 |
A0A443HTP6 | A0A443I1K5 | GATA factor AREB beta. | Siderophore transcription factor SreA. | 0.490 |
A0A443HTP6 | A0A443I5Y1 | GATA factor AREB beta. | Putative homeobox transcription factor. | 0.617 |
A0A443HYN0 | A0A443HTP6 | GATA transcriptional activator area. | GATA factor AREB beta. | 0.747 |
A0A443HYN0 | A0A443HYR5 | GATA transcriptional activator area. | MADS-box domain-containing protein. | 0.876 |
A0A443HYN0 | A0A443I1K5 | GATA transcriptional activator area. | Siderophore transcription factor SreA. | 0.817 |
A0A443HYN0 | A0A443I5Y1 | GATA transcriptional activator area. | Putative homeobox transcription factor. | 0.617 |
A0A443HYR5 | A0A443HK09 | MADS-box domain-containing protein. | Uncharacterized protein. | 0.774 |
A0A443HYR5 | A0A443HLI3 | MADS-box domain-containing protein. | Homeobox KN domain-containing protein. | 0.584 |
A0A443HYR5 | A0A443HTP6 | MADS-box domain-containing protein. | GATA factor AREB beta. | 0.672 |
A0A443HYR5 | A0A443HYN0 | MADS-box domain-containing protein. | GATA transcriptional activator area. | 0.876 |
A0A443HYR5 | A0A443HZQ5 | MADS-box domain-containing protein. | RSC complex subunit Sfh1. | 0.748 |
A0A443HYR5 | A0A443I1K5 | MADS-box domain-containing protein. | Siderophore transcription factor SreA. | 0.706 |
page 1 of 3