Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A443HII0 | A0A443HJ27 | Chimaerin. | Putative ras GTPase Rab11. | 0.968 |
A0A443HII0 | A0A443HUZ4 | Chimaerin. | Acyl CoA binding protein-domain-containing protein. | 0.581 |
A0A443HII0 | A0A443HVJ8 | Chimaerin. | Uncharacterized protein. | 0.420 |
A0A443HII0 | A0A443I7A5 | Chimaerin. | Protein kinase domain-containing protein. | 0.768 |
A0A443HII0 | A0A443I864 | Chimaerin. | Zn(2)-C6 fungal-type domain-containing protein. | 0.645 |
A0A443HJ27 | A0A443HII0 | Putative ras GTPase Rab11. | Chimaerin. | 0.968 |
A0A443HJ27 | A0A443HUZ4 | Putative ras GTPase Rab11. | Acyl CoA binding protein-domain-containing protein. | 0.623 |
A0A443HJ27 | A0A443I7A5 | Putative ras GTPase Rab11. | Protein kinase domain-containing protein. | 0.770 |
A0A443HJ27 | A0A443I864 | Putative ras GTPase Rab11. | Zn(2)-C6 fungal-type domain-containing protein. | 0.629 |
A0A443HPB9 | A0A443I864 | NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | Zn(2)-C6 fungal-type domain-containing protein. | 0.637 |
A0A443HR51 | A0A443HWE7 | AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. | Adaptor complexes medium subunit family; Belongs to the adaptor complexes medium subunit family. | 0.996 |
A0A443HR51 | A0A443I864 | AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. | Zn(2)-C6 fungal-type domain-containing protein. | 0.714 |
A0A443HUZ4 | A0A443HII0 | Acyl CoA binding protein-domain-containing protein. | Chimaerin. | 0.581 |
A0A443HUZ4 | A0A443HJ27 | Acyl CoA binding protein-domain-containing protein. | Putative ras GTPase Rab11. | 0.623 |
A0A443HUZ4 | A0A443I864 | Acyl CoA binding protein-domain-containing protein. | Zn(2)-C6 fungal-type domain-containing protein. | 0.672 |
A0A443HVJ8 | A0A443HII0 | Uncharacterized protein. | Chimaerin. | 0.420 |
A0A443HVJ8 | A0A443I864 | Uncharacterized protein. | Zn(2)-C6 fungal-type domain-containing protein. | 0.637 |
A0A443HWE7 | A0A443HR51 | Adaptor complexes medium subunit family; Belongs to the adaptor complexes medium subunit family. | AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. | 0.996 |
A0A443HWE7 | A0A443I864 | Adaptor complexes medium subunit family; Belongs to the adaptor complexes medium subunit family. | Zn(2)-C6 fungal-type domain-containing protein. | 0.783 |
A0A443I1J4 | A0A443I5F9 | Kinetochore protein Nuf2. | HEC/Ndc80p family protein. | 0.999 |
page 1 of 2