STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A443I8E7Zinc finger protein gcs1. (376 aa)    
Predicted Functional Partners:
A0A443HU64
Arf-GAP domain-containing protein.
   
0.956
A0A443HIP0
ADP-ribosylation factor.
   
 0.877
A0A443HIW7
GTP-binding ADP-ribosylation factor Arf1; Belongs to the small GTPase superfamily. Arf family.
   
 0.877
A0A443HRQ4
Uncharacterized protein.
   
 0.877
A0A443I6U6
Arf-GAP domain-containing protein.
    
0.872
A0A443I7I3
Uncharacterized protein.
   
 0.868
A0A443I1Q3
SEC7 domain-containing protein.
    
 0.862
A0A443HUM9
ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.857
A0A443I5N7
ADP-ribosylation factor family-domain-containing protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.840
A0A443HIW3
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.
   
 0.831
Your Current Organism:
Byssochlamys spectabilis
NCBI taxonomy Id: 264951
Other names: ATCC 90900, B. spectabilis, Byssochlamys spectabilis (Udagawa & Shoji Suzuki) Houbraken & Samson 2008, CBS 101075, FRR 5219, JCM 12815, Pacilomyces variotii, Paecilomyces spectabilis, Paecilomyces variotii, Paecilomyces variotti, Paecilomyces vatiotii, Talaromyces spectabilis
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