STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A443I8P1RNA-dependent RNA polymerase. (1323 aa)    
Predicted Functional Partners:
A0A443I1P6
ATP-dependent helicase dcl1; Belongs to the helicase family. Dicer subfamily.
    
 
 0.684
A0A443I279
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
    
 
 0.572
A0A443HK37
RNA helicase.
      
 0.540
A0A443HNU9
RNA helicase.
      
 0.540
A0A443HV23
RNA helicase.
      
 0.540
A0A443HUH9
Putative topoisomerase family protein TRF4.
    
 
 0.495
A0A443HN24
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
  
 
 
 0.491
A0A443HJ52
Ribonuclease III domain-containing protein.
    
 
 0.472
A0A443HWT3
Ribonuclease III domain-containing protein.
    
 
 0.472
A0A443HNV2
Putative eukaryotic translation initiation factor eIF-2C4; Belongs to the argonaute family.
    
 
 0.465
Your Current Organism:
Byssochlamys spectabilis
NCBI taxonomy Id: 264951
Other names: ATCC 90900, B. spectabilis, Byssochlamys spectabilis (Udagawa & Shoji Suzuki) Houbraken & Samson 2008, CBS 101075, FRR 5219, JCM 12815, Pacilomyces variotii, Paecilomyces spectabilis, Paecilomyces variotii, Paecilomyces variotti, Paecilomyces vatiotii, Talaromyces spectabilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.