Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mfla_0010Transport-associated protein. (101 aa)    
Predicted Functional Partners:
Mfla_2651
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
 
    0.914
Mfla_2586
Conserved hypothetical protein.
   
    0.830
Mfla_0950
Transport-associated protein.
 
    0.774
Mfla_1094
Transport-associated protein.
 
    0.774
Mfla_0947
Protein of unknown function DUF1328.
  
    0.740
Mfla_1091
Protein of unknown function DUF1328.
  
    0.740
Mfla_1200
AsmA.
  
  
 0.596
Mfla_2017
Glycosyl transferase, family 2.
   
    0.533
Mfla_0622
Conserved hypothetical protein.
  
     0.433
Mfla_0656
Osmotically inducible lipoprotein.
   
    0.424
Your Current Organism:
Methylobacillus flagellatus
NCBI taxonomy Id: 265072
Other names: M. flagellatus KT, Methylobacillus flagellatus KT, Methylobacillus flagellatus str. KT, Methylobacillus flagellatus strain KT
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