node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplQ | rpoA | Mfla_0305 | Mfla_0304 | PFAM: ribosomal protein L17; KEGG: dar:Daro_0346 ribosomal protein L17; COGs: COG0203 Ribosomal protein L17 category=J. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
rplQ | rpoB | Mfla_0305 | Mfla_0272 | PFAM: ribosomal protein L17; KEGG: dar:Daro_0346 ribosomal protein L17; COGs: COG0203 Ribosomal protein L17 category=J. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.982 |
rplQ | rpoC | Mfla_0305 | Mfla_0273 | PFAM: ribosomal protein L17; KEGG: dar:Daro_0346 ribosomal protein L17; COGs: COG0203 Ribosomal protein L17 category=J. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.988 |
rplQ | rpoZ | Mfla_0305 | Mfla_0049 | PFAM: ribosomal protein L17; KEGG: dar:Daro_0346 ribosomal protein L17; COGs: COG0203 Ribosomal protein L17 category=J. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.705 |
rplQ | rpsC | Mfla_0305 | Mfla_0285 | PFAM: ribosomal protein L17; KEGG: dar:Daro_0346 ribosomal protein L17; COGs: COG0203 Ribosomal protein L17 category=J. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.997 |
rplQ | rpsE | Mfla_0305 | Mfla_0296 | PFAM: ribosomal protein L17; KEGG: dar:Daro_0346 ribosomal protein L17; COGs: COG0203 Ribosomal protein L17 category=J. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.998 |
rplQ | rpsH | Mfla_0305 | Mfla_0293 | PFAM: ribosomal protein L17; KEGG: dar:Daro_0346 ribosomal protein L17; COGs: COG0203 Ribosomal protein L17 category=J. | SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.998 |
rplQ | rpsK | Mfla_0305 | Mfla_0303 | PFAM: ribosomal protein L17; KEGG: dar:Daro_0346 ribosomal protein L17; COGs: COG0203 Ribosomal protein L17 category=J. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.998 |
rplQ | rpsM | Mfla_0305 | Mfla_0302 | PFAM: ribosomal protein L17; KEGG: dar:Daro_0346 ribosomal protein L17; COGs: COG0203 Ribosomal protein L17 category=J. | SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.998 |
rplQ | rpsQ | Mfla_0305 | Mfla_0288 | PFAM: ribosomal protein L17; KEGG: dar:Daro_0346 ribosomal protein L17; COGs: COG0203 Ribosomal protein L17 category=J. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.998 |
rpoA | rplQ | Mfla_0304 | Mfla_0305 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | PFAM: ribosomal protein L17; KEGG: dar:Daro_0346 ribosomal protein L17; COGs: COG0203 Ribosomal protein L17 category=J. | 0.998 |
rpoA | rpoB | Mfla_0304 | Mfla_0272 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
rpoA | rpoC | Mfla_0304 | Mfla_0273 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
rpoA | rpoZ | Mfla_0304 | Mfla_0049 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.998 |
rpoA | rpsC | Mfla_0304 | Mfla_0285 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.997 |
rpoA | rpsE | Mfla_0304 | Mfla_0296 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.998 |
rpoA | rpsH | Mfla_0304 | Mfla_0293 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.998 |
rpoA | rpsK | Mfla_0304 | Mfla_0303 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
rpoA | rpsM | Mfla_0304 | Mfla_0302 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.999 |
rpoA | rpsQ | Mfla_0304 | Mfla_0288 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.997 |