STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mfla_0977TonB-dependent receptor. (411 aa)    
Predicted Functional Partners:
Mfla_0818
TonB-dependent receptor, plug.
 
     0.976
Mfla_1351
TonB-dependent receptor.
 
   
 0.637
Mfla_0978
TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; MutS II domain protein; MutS IV domain protein; KEGG: cvi:CV3661 DNA mismatch repair protein; COGs: COG0249 Mismatch repair ATPase (MutS family) category=L.
       0.566
Mfla_0134
TonB-dependent receptor.
  
  
 0.452
Mfla_0708
TonB-dependent receptor, plug.
  
    0.450
Mfla_2428
Conserved hypothetical protein.
  
     0.423
Mfla_0527
Conserved hypothetical protein.
  
     0.413
Your Current Organism:
Methylobacillus flagellatus
NCBI taxonomy Id: 265072
Other names: M. flagellatus KT, Methylobacillus flagellatus KT, Methylobacillus flagellatus str. KT, Methylobacillus flagellatus strain KT
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.