Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Mfla_1266 | Mfla_1267 | Radical SAM. | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.773 |
Mfla_1266 | Mfla_1268 | Radical SAM. | Mannose-6-phosphate isomerase, type 2; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PRIAM: Mannose-1-phosphate guanylyltransferase (GDP); PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein; KEGG: mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase; COGs: COG0836 Mannose-1-phosphate guanylyltransferase category=M. | 0.460 |
Mfla_1266 | Mfla_1269 | Radical SAM. | ABC-2. | 0.417 |
Mfla_1266 | Mfla_1553 | Radical SAM. | DNA polymerase III, epsilon subunit. | 0.540 |
Mfla_1267 | Mfla_1266 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Radical SAM. | 0.773 |
Mfla_1267 | Mfla_1268 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Mannose-6-phosphate isomerase, type 2; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PRIAM: Mannose-1-phosphate guanylyltransferase (GDP); PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein; KEGG: mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase; COGs: COG0836 Mannose-1-phosphate guanylyltransferase category=M. | 0.450 |
Mfla_1267 | Mfla_1269 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | ABC-2. | 0.417 |
Mfla_1268 | Mfla_1266 | Mannose-6-phosphate isomerase, type 2; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PRIAM: Mannose-1-phosphate guanylyltransferase (GDP); PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein; KEGG: mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase; COGs: COG0836 Mannose-1-phosphate guanylyltransferase category=M. | Radical SAM. | 0.460 |
Mfla_1268 | Mfla_1267 | Mannose-6-phosphate isomerase, type 2; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PRIAM: Mannose-1-phosphate guanylyltransferase (GDP); PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein; KEGG: mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase; COGs: COG0836 Mannose-1-phosphate guanylyltransferase category=M. | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.450 |
Mfla_1268 | Mfla_1269 | Mannose-6-phosphate isomerase, type 2; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PRIAM: Mannose-1-phosphate guanylyltransferase (GDP); PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein; KEGG: mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase; COGs: COG0836 Mannose-1-phosphate guanylyltransferase category=M. | ABC-2. | 0.901 |
Mfla_1269 | Mfla_1266 | ABC-2. | Radical SAM. | 0.417 |
Mfla_1269 | Mfla_1267 | ABC-2. | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.417 |
Mfla_1269 | Mfla_1268 | ABC-2. | Mannose-6-phosphate isomerase, type 2; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PRIAM: Mannose-1-phosphate guanylyltransferase (GDP); PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein; KEGG: mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase; COGs: COG0836 Mannose-1-phosphate guanylyltransferase category=M. | 0.901 |
Mfla_1553 | Mfla_1266 | DNA polymerase III, epsilon subunit. | Radical SAM. | 0.540 |