STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mfla_1790Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (338 aa)    
Predicted Functional Partners:
Mfla_1791
Alpha/beta hydrolase fold-3.
 
     0.542
Mfla_2734
PRIAM: Glutamate synthase (NADPH); PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: atc:AGR_C_235 hypothetical protein; COGs: COG0069 Glutamate synthase domain 2 category=E.
     
 0.512
Mfla_1792
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.488
Mfla_0020
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.451
Mfla_1794
RND efflux system, outer membrane lipoprotein, NodT.
 
    0.433
Mfla_0726
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.410
Your Current Organism:
Methylobacillus flagellatus
NCBI taxonomy Id: 265072
Other names: M. flagellatus KT, Methylobacillus flagellatus KT, Methylobacillus flagellatus str. KT, Methylobacillus flagellatus strain KT
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