STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mfla_2141Type II secretion system protein E. (569 aa)    
Predicted Functional Partners:
Mfla_2142
Type II secretion system protein.
 
 0.976
Mfla_0079
Type II secretion system protein.
 
 0.905
Mfla_1342
Type II secretion system protein.
 
 0.905
Mfla_2420
Type II secretion system protein.
 
 0.905
Mfla_2225
Type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.820
Mfla_1498
Type IV pilus assembly PilZ.
  
 
 
 0.617
Mfla_2457
Type II and III secretion system protein.
 
 
 
 0.605
Mfla_2093
DNA internalization-related competence protein ComEC/Rec2.
  
  
 0.598
Mfla_2461
Type IV pilus assembly protein PilM.
 
 
 
 0.577
Mfla_2460
Fimbrial assembly.
  
 
 0.558
Your Current Organism:
Methylobacillus flagellatus
NCBI taxonomy Id: 265072
Other names: M. flagellatus KT, Methylobacillus flagellatus KT, Methylobacillus flagellatus str. KT, Methylobacillus flagellatus strain KT
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.