STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAK84437.1Na(+)-linked D-alanine glycine permease. (388 aa)    
Predicted Functional Partners:
GAK84438.1
Na(+)-linked D-alanine glycine permease.
     0.949
GAK85666.1
Hypothetical protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
  0.505
GAK86317.1
Proline/sodium symporter PutP; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.478
GAK83083.1
Membrane protein.
   
    0.454
GAK82557.1
H(+)/Cl(-) exchange transporter ClcA.
   
    0.428
GAK82558.1
H(+)/Cl(-) exchange transporter ClcA.
   
    0.428
GAK82893.1
Flagellar basal-body rod protein FlgG.
    
   0.426
GAK82894.1
Flagellar basal-body rod protein FlgG.
    
   0.426
GAK83081.1
Membrane protein.
   
    0.414
GAK83082.1
Membrane protein.
   
    0.414
Your Current Organism:
Vibrio ponticus
NCBI taxonomy Id: 265668
Other names: CCUG 50742, CECT 5869, DSM 16217, V. ponticus, Vibrio ponticus Macian et al. 2005, Vibrio sp. JCM 19238, strain 369
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.