STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAK84995.1Hypothetical protein YciN. (82 aa)    
Predicted Functional Partners:
GAK85219.1
Hypothetical protein.
  
     0.773
GAK85317.1
Fermentation/respiration switch protein.
  
     0.769
GAK85624.1
Chypothetical protein.
  
     0.765
GAK87838.1
YcfP protein; Belongs to the UPF0227 family.
  
     0.765
GAK85316.1
Fermentation/respiration switch protein; Belongs to the UPF0255 family.
  
     0.756
GAK85318.1
Curlin genes transcriptional activator.
  
     0.754
GAK82685.1
Outer membrane lipoprotein.
  
     0.751
GAK84767.1
Adenylate cyclase.
  
     0.748
GAK85197.1
BarA sensory histidine kinase.
  
     0.746
GAK87870.1
Hypothetical protein; Belongs to the UPF0304 family.
  
     0.746
Your Current Organism:
Vibrio ponticus
NCBI taxonomy Id: 265668
Other names: CCUG 50742, CECT 5869, DSM 16217, V. ponticus, Vibrio ponticus Macian et al. 2005, Vibrio sp. JCM 19238, strain 369
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.