STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAK82737.1Hypothetical protein. (242 aa)    
Predicted Functional Partners:
GAK83254.1
Putative analog of CcoH.
  
     0.774
GAK85438.1
Periplasmic/membrane protein associated with DUF414.
  
     0.768
GAK86958.1
Hypothetical protein.
  
     0.768
GAK83891.1
Hypothetical protein.
  
     0.766
GAK84742.1
Hypothetical protein.
  
     0.763
GAK87661.1
ATPase involved in DNA repair.
  
     0.762
GAK85189.1
General secretion pathway protein B.
  
     0.760
GAK86627.1
Hypothetical protein.
  
     0.758
GAK85300.1
Probable exported or periplasmic protein in ApbE locus.
  
     0.757
GAK84980.1
Hypothetical protein.
  
     0.755
Your Current Organism:
Vibrio ponticus
NCBI taxonomy Id: 265668
Other names: CCUG 50742, CECT 5869, DSM 16217, V. ponticus, Vibrio ponticus Macian et al. 2005, Vibrio sp. JCM 19238, strain 369
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.